PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla007092
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family ERF
Protein Properties Length: 182aa    MW: 19766.7 Da    PI: 7.8693
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla007092genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.71.9e-201160255
        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
               +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a+++++g
  Cla007092 11 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDNAALRFKG 60
               7********.**********94....45***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.4E-331069IPR001471AP2/ERF domain
SMARTSM003803.5E-381174IPR001471AP2/ERF domain
PROSITE profilePS5103224.8821168IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-221169IPR016177DNA-binding domain
PfamPF008472.3E-131160IPR001471AP2/ERF domain
CDDcd000182.73E-231169No hitNo description
PRINTSPR003679.9E-121223IPR001471AP2/ERF domain
PRINTSPR003679.9E-123450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MAETESGRKR HYRGVRQRPW GKWAAEIRDP KKAARVWLGT FDTAEAAAIA YDNAALRFKG  60
TKAKLNFPER VQANPSDFGF LPSAASTAAS SAAPPPQAAV ASFSSPSLSL PPPLSEEEAF  120
PGLHQYAQLL SSTDADFPYY SSTLLLNQQQ THYPFSSSSS TQPHQQDQDH YGKDFGTGGS  180
TN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A5e-271073468ATERF1
2gcc_A5e-271073468ATERF1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankLN6819251e-71LN681925.1 Cucumis melo genomic scaffold, anchoredscaffold00052.
GenBankLN7132651e-71LN713265.1 Cucumis melo genomic chromosome, chr_11.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011658395.12e-70PREDICTED: ethylene-responsive transcription factor ERF113
SwissprotQ9LYU37e-43EF113_ARATH; Ethylene-responsive transcription factor ERF113
TrEMBLA0A0A0K9G51e-72A0A0A0K9G5_CUCSA; Uncharacterized protein
STRINGGLYMA08G28835.17e-49(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.11e-31related to AP2 6l